研究目的
To quantitatively investigate the interaction between sulfated polysaccharides with potent anti-HIV activity and HIV oligopeptides to elucidate the anti-HIV mechanism of sulfated polysaccharides.
研究成果
The study concludes that sulfated polysaccharides exhibit strong electrostatic interactions with positively charged regions of HIV gp120, particularly in the V3 loop and C-terminus regions. This interaction is dependent on the molecular weight and degree of sulfation of the polysaccharides, suggesting a potential mechanism for their anti-HIV activity.
研究不足
The study focused on the interaction between sulfated polysaccharides and specific oligopeptides from HIV gp120. The findings are based on in vitro experiments, and further studies are needed to understand the interactions in vivo.
1:Experimental Design and Method Selection
The study used surface plasmon resonance (SPR) and dynamic light scattering (DLS) to investigate the interaction between sulfated polysaccharides and HIV oligopeptides. The apparent association- and dissociation rate constants were measured to understand the kinetic interactions.
2:Sample Selection and Data Sources
Dextran and curdlan sulfates with varying molecular weights and degrees of sulfation were used as model sulfated polysaccharides. Poly-L-lysine and three oligopeptides from the HIV gp120 were used as model proteins.
3:List of Experimental Equipment and Materials
Biacore CM5 and SA sensor chips, amine coupling kit, poly-L-lysine hydrobromide, dextran sulfates, curdlan sulfate, sulfur trioxide?pyridine complex, Fmoc-amino acids for oligopeptide synthesis, Biacore X100 for SPR measurements, Otsuka Electronics ELSZ?1000ZS for DLS and zeta potential measurements.
4:Experimental Procedures and Operational Workflow
Poly-L-lysine and HIV oligopeptides were immobilized on sensor chips. The interaction with sulfated polysaccharides was measured using SPR. Particle size and zeta potential measurements were conducted using DLS.
5:Data Analysis Methods
The apparent kinetic constants (ka and kd) were calculated using Biacore-provided BIA evaluation software and a 1:1 binding fitting model. Particle size and zeta potential data were analyzed to support the SPR findings.
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Biacore CM5 sensor chip
CM5
GE Healthcare Bio-Sciences AB
Used for immobilizing poly-L-lysine and measuring interactions with sulfated polysaccharides via SPR.
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Biacore SA sensor chip
SA
GE Healthcare Bio-Sciences AB
Used for immobilizing biotinylated oligopeptides and measuring interactions with sulfated polysaccharides via SPR.
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Amine coupling kit
GE Healthcare Bio-Sciences AB
Contains NHS, EDC, and ethanolamine hydrochloride for immobilizing ligands on sensor chips.
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Poly-L-lysine hydrobromide
Sigma?Aldrich
Used as a model protein for interaction studies with sulfated polysaccharides.
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Dextran sulfates
Sigma?Aldrich
Model sulfated polysaccharides with varying molecular weights and degrees of sulfation for interaction studies.
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Curdlan sulfate
Ajinomoto Co. Ltd.
Model sulfated polysaccharide with potent anti-HIV activity for interaction studies.
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Sulfur trioxide?pyridine complex
SO3?Py
TCI
Used for sulfation of dextran to synthesize dextran sulfates.
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Fmoc-amino acids
Watanabe Chemical IND., LTD
Used for the synthesis of oligopeptides.
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Biacore X100
X100
GE Healthcare Bio-Sciences AB
SPR apparatus used to measure the interaction between sulfated polysaccharides and oligopeptides.
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Otsuka Electronics ELSZ?1000ZS
ELSZ?1000ZS
Otsuka Electronics
Zeta potential and particle size analyzer used to measure the interaction between sulfated polysaccharides and poly-L-lysine.
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Biotage Eight peptide synthesizer
Eight
Biotage
Used for the synthesis of oligopeptides.
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