研究目的
Investigating the activation-linked conformational transitions in individual G protein-coupled receptor (GPCR) molecules in real-time to understand the equilibrium distribution of inactive and active receptor conformations and the rate constants for conformational exchange.
研究成果
The single-molecule assay provides detailed mechanistic information on the linkage of receptor activation to ligand binding, which is useful for the design of improved GPCR-targeting drugs. The assay reveals spontaneous transitions between inactive and active-like conformations and how these transitions are influenced by ligands.
研究不足
The study is focused on the β2 adrenergic receptor, and while the methods can be extended to other GPCRs, the specific conditions and labeling strategies may need to be optimized for different receptors.
1:Experimental Design and Method Selection:
The study employs a novel single-molecule assay that monitors activation-linked conformational transitions in individual GPCR molecules in real-time using single-molecule total internal reflection fluorescence microscopy.
2:Sample Selection and Data Sources:
The β2 adrenergic receptor (β2AR) is site-specifically labeled with a Cy3 fluorescence probe and reconstituted in phospholipid nanodiscs.
3:List of Experimental Equipment and Materials:
Includes a microscope capable of total internal reflection fluorescence (TIRF) measurements, a 532 nm laser for excitation, and an intensified charge coupled device (CCD) camera.
4:Experimental Procedures and Operational Workflow:
The receptor is labeled, reconstituted in nanodiscs, and tethered to a microscope slide for observation.
5:Data Analysis Methods:
The emission intensity of each identified spot is acquired and analyzed to determine the equilibrium distribution of inactive and active conformational states of the receptor.
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Ni-NTA resin
88222
Thermo Fisher Scientific, Thermo Scientific?
Purification of the receptor protein with poly-histidine tag.
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Axiovert 200 microscope
Axiovert 200
Carl Zeiss
Total internal reflection fluorescence (TIRF) measurements.
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Water-immersion C-Apochromat 63x/1.2 W objective
C-Apochromat 63x/1.2 W Corr
Carl Zeiss
Used for TIRF microscopy.
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Charge-coupled device (EMCCD) camera
DU-897E iXon+ EMCCD
Andor Technology
Detection of fluorescence emission from single fluorophores.
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PD-10 desalting column
17085101
GE Healthcare
Desalting and buffer exchange of protein samples.
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Quartz microscope slides
http://finkenbeiner.com/quartzslides.php
Used for immobilizing receptor-nanodisc complexes for TIRF microscopy.
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Microscope cover slips
12-545-C
Fisher Scientific
Used in the preparation of the sample chamber for TIRF microscopy.
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Double sided tape
Scotch, 3M
Used to create a microfluidic channel on the quartz slide.
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100 kDa MWCO vivaspin 2 concentrators
VS1041
Sartorius
Concentration of protein samples.
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Cy3 maleimide, mono-reactive dye
PA13131
GE Healthcare
Fluorescent labeling of the receptor.
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Talon metal affinity resin
635502
Takara Bio
Purification of the receptor protein with poly-histidine tag.
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Superdex 200 Increase 100/300 size exclusion column
17517501
GE Healthcare
Size exclusion chromatography for purification of nanodiscs.
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532 nm (green) laser
CL532-050-S
CrystaLaser
Excitation of the Cy3 fluorophore.
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