研究目的
Investigating the use of hyperspectral microscope imaging (HMI) technology coupled with deep learning frameworks for rapid classification of foodborne bacteria at the single-cell level.
研究成果
The proposed HMI technology coupled with the 'Fusion-Net' DL framework demonstrated high accuracy in classifying foodborne bacteria at the single-cell level, offering a rapid, non-invasive, and label-free diagnostic tool. This approach eliminates the need for long-time culturing and promotes early bacteria detection, which is necessary for practical applications.
研究不足
The study focused on laboratory-prepared samples, and further testing is needed using food matrix for practical applications in the food industry and clinical laboratory.
1:Experimental Design and Method Selection:
The study employed a high-throughput hyperspectral microscope imaging (HMI) technology with a hybrid deep learning (DL) framework called 'Fusion-Net' for the classification of foodborne bacteria. The HMI data were decomposed into morphological features, intensity images, and spectral profiles for analysis.
2:Sample Selection and Data Sources:
Five common foodborne bacterial cultures (Campylobacter jejuni, generic Escherichia coli, Listeria innocua, Staphylococcus aureus, and Salmonella Typhimurium) were prepared and imaged using the HMI system.
3:List of Experimental Equipment and Materials:
The HMI system included an electron-multiplying charge-coupled device (EMCCD) camera, acousto-optic tunable filter (AOTF) spectrometer, upright microscope, and metal-halide light source. ImageJ software was used for data preparation.
4:Experimental Procedures and Operational Workflow:
Bacterial cultures were prepared, imaged using the HMI system, and the resulting hypercubes were processed to extract single-cell hypercubes. These were then decomposed into three types of data features for analysis.
5:Data Analysis Methods:
Multiple advanced DL frameworks (LSTM, ResNet, 1D-CNN) were utilized for classification, and a fusion strategy was employed to combine these frameworks into 'Fusion-Net' for improved accuracy.
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