研究目的
To investigate the optical properties of a silicon nitride film and develop a novel correlative light and electron microscopy system that enables sequential observation of the same specimens using optical microscopy and transmission electron microscopy.
研究成果
The 30 nm thick silicon nitride film exhibits excellent optical properties for use in microscopy, with high transmittance and minimal autofluorescence. The developed CLEM linkage system enables efficient sequential observation of the same specimens using OM and TEM, facilitating correlative analysis. This approach is valuable for applications in industrial quality control and scientific research, allowing detailed investigation of relationships between optical functions and nanostructures.
研究不足
The system may have limitations in handling very large specimens due to motion range constraints of the TEM stage. Autofluorescence in thicker SiN films (e.g., 50 nm) could interfere with certain fluorescence detections, such as Cy5 wavelength. The method requires specialized equipment and fabrication processes for SiN films and custom holders, which may not be universally accessible.
1:Experimental Design and Method Selection:
The study involved designing a CLEM system using a silicon nitride film as a substrate. Optical properties (transmittance and autofluorescence) of SiN films of different thicknesses were measured to determine suitability for microscopy. A novel linkage system with exchangeable components was developed for switching between OM and TEM observations.
2:Sample Selection and Data Sources:
Silicon nitride films (30 nm and 50 nm thick) fabricated using chemical vapor deposition and lithography. A blue-color toner sample was used for application testing, embedded in Epon 812 resin and sliced to 70 nm sections.
3:List of Experimental Equipment and Materials:
Microscopic spectrophotometer (MSV-370, JASCO Corporation), confocal laser microscopy system (ECLIPSE Ti2 and confocal system A1+, Nikon), optical microscope (ECLIPSE LV100ND, Nikon), transmission electron microscope (JEM-1400Flash, JEOL), ultramicrotome (Leica UC6, Leica), silicon nitride films, cover slips (MATSUNAMI Micro cover glass), Texas Red filter cube, imaging software (Picture Overlay, JEOL Ltd.), and custom-developed CLEM retainer, TEM holder, and OM adapter.
4:Experimental Procedures and Operational Workflow:
- Measure light transmittance of SiN films using spectrophotometer. - Measure autofluorescence using confocal microscopy. - Fabricate SiN window chips. - Develop and assemble CLEM linkage system components. - Mount toner sections on SiN window chips. - Observe samples sequentially with OM (bright field and fluorescence) and TEM, using the exchangeable retainer system. - Merge images using software for correlative analysis.
5:Data Analysis Methods:
Quantitative analysis of transmittance and fluorescence intensity from spectrophotometer and microscopy data. Image merging and comparison using Picture Overlay software to correlate OM and TEM observations.
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microscopic spectrophotometer
MSV-370
JASCO Corporation
Measure light transmittance of silicon nitride films
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transmission electron microscope
JEM-1400Flash
JEOL
Observe ultrastructure of samples at high magnification
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ultramicrotome
Leica UC6
Leica
Slice embedded samples into ultrathin sections
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imaging software
Picture Overlay
JEOL Ltd.
Merge fluorescent and TEM images for correlative analysis
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confocal laser microscopy system
ECLIPSE Ti2 and confocal system A1+
Nikon
Measure autofluorescence of silicon nitride films
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optical microscope
ECLIPSE LV100ND
Nikon
Observe samples using bright field and fluorescence microscopy
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cover slip
MATSUNAMI Micro cover glass
MATSUNAMI GLASS
Used as a control in optical property measurements
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CLEM retainer
JEOL Ltd.
Hold SiN window chip and allow attachment to TEM holder and OM adapter
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TEM holder
JEOL Ltd.
Hold CLEM retainer for TEM observation, with extended motion range
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OM adapter
JEOL Ltd.
Hold CLEM retainer for OM observation, compatible with upright and inverted microscopes
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