研究目的
Investigating photoinduced electron transfer between Zn porphyrin and Fe porphyrin within supramolecular cytochrome b562 co-assemblies and heterodimers to understand the role of hydrogen-bond networks and structural rigidity in facilitating efficient electron transfer.
研究成果
The study demonstrates that rigid hemoprotein assemblies with hydrogen-bond networks enable efficient single-step photoinduced electron transfer over long distances (up to 29 ?), with kinetic constants dependent on structural rigidity and cofactor positions. This provides insights for designing artificial ET systems mimicking natural processes, with implications for bioinspired optoelectronics and energy conversion.
研究不足
The heterodimers showed structural instability with some ET-inactive species, and the exact ET pathways and structural differences between Zn-Fe and Fe-Zn dimers require further computational simulation for precise understanding. The study is limited to specific protein mutants and conditions, and potential photodegradation or solvation effects may influence results.
1:Experimental Design and Method Selection:
The study involved preparing cytochrome b562 co-assemblies and heterodimers with Fe and Zn porphyrins using metalloporphyrin–heme pocket interactions and hydrogen-bond networks. Laser flash photolysis was used to monitor photoinduced electron transfer kinetics, and Marcus theory was applied for analysis.
2:Sample Selection and Data Sources:
Cytochrome b562 and its mutants (N80C, R98A/N80C, D73A/N80C) were expressed in E. coli and purified. Apo-proteins were prepared, and co-assemblies/heterodimers were formed by mixing FeP and ZnP-containing assemblies or via maleimide-thiol conjugation.
3:List of Experimental Equipment and Materials:
Equipment included ESI-TOF MS (Bruker Daltonics micrOTOF II), UV-vis spectrometers (Shimadzu UV-3150, UV-2550, JASCO V-670), CD spectrometer (JASCO J-820S), fluorescence spectrometer (JASCO FP-8600), SEC system (?KTApurifier, GE Healthcare), pH meter (Horiba F-52), glove box (MBraun UNILab), laser flash photolysis setup with Nd:YAG laser, Xenon lamp, monochromator, photomultiplier (Unisoku), oscilloscope (Tektronix TDS3012), and software (KaleidaGraph). Materials included Fe and Zn protoporphyrin IX complexes, Cyt b562 mutants, buffers, and chemicals like DTT and potassium ferricyanide.
4:Experimental Procedures and Operational Workflow:
Co-assemblies were prepared by mixing FeP and ZnP assemblies and equilibrating; heterodimers were formed via conjugation and purified by gel filtration. Samples were degassed and placed in quartz cells for laser flash photolysis at 532 nm, monitoring transient absorptions at specific wavelengths (e.g., 460 nm for triplet states, 680 nm for ZnP radical cation).
5:Data Analysis Methods:
Transient absorption decays were fitted using exponential equations in KaleidaGraph to extract kinetic constants (kCS, kCR, ki). Marcus equation was used to analyze ET kinetics, considering driving force, reorganization energy, and electronic coupling.
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mass spectrometer
micrOTOF II
Bruker Daltonics
Performing ESI-TOF MS analyses for protein identification.
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UV-vis spectrometer
UV-3150
Shimadzu
Measuring UV-vis spectra of samples.
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UV-vis spectrometer
UV-2550
Shimadzu
Measuring UV-vis spectra of samples.
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UV-vis spectrometer
V-670
JASCO
Measuring UV-vis spectra of samples.
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CD spectrometer
J-820S
JASCO
Recording circular dichroism spectra.
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fluorescence spectrometer
FP-8600
JASCO
Measuring luminescence spectra.
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oscilloscope
TDS3012
Tektronix
Digitizing transient signals.
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SEC system
?KTApurifier
GE Healthcare
Performing size exclusion chromatographic analyses.
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pH meter
F-52
Horiba
Measuring pH of solutions.
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glove box
UNILab
MBraun
Performing air-sensitive manipulations.
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laser
Nd:YAG laser
Delivering 6-ns pulses at 532 nm for flash photolysis.
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Xenon arc lamp
Serving as a continuous probe source for flash photolysis.
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photmultiplier
Unisoku
Detecting transient signals in transmission during flash photolysis.
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software
KaleidaGraph Version 4.00
Synergy Software
Fitting transient absorption decay data.
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column
Superdex 200 10/300 GL
GE Healthcare
Purifying proteins by size exclusion chromatography.
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column
Superdex 200 Increase 10/300 GL
GE Healthcare
Purifying heterodimers by gel filtration chromatography.
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column
HiTrap desalting column
GE Healthcare
Purifying proteins after oxidation or reduction.
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