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A DNA-Encapsulated Silver Cluster and the Roles of Its Nucleobase Ligands

DOI:10.1021/acs.jpcc.8b09414 期刊:The Journal of Physical Chemistry C 出版年份:2018 更新时间:2025-09-23 15:21:21
摘要: Silver clusters consisting of ~10 atoms are readily bound by and encapsulated within DNA strands to yield strong absorption and emission. The coordination environments, however, are poorly understood, so cluster adducts can only be empirically tuned. This work describes the C4AC4TC3G strand that templates a particular cluster adduct. Its sequence has three types of nucleobases with distinct roles – tracts of cytosines that collectively coordinate the cluster, thymine acting as a junction in the overall strand, and the adenine/guanine pair that exclusively forms the cluster. In relation to the native oligonucleotide, the DNA-silver cluster complex diffuses faster and is more compact, thus suggesting that the strands folds because of the cluster. The Ag10 6+ adduct emits with λex/λem = 490/540 nm, a 19% quantum yield, and a biexponential 1.1/2.1 ns lifetime. The electronic environment for the cluster is controlled by the heteroatoms in the adenine and guanine. Most significantly, the N7 and the N2 in the guanine change the fluorescence quantum yield by 60-fold and shift the fluorescence lifetime by ~3.8 ns. Thus, our studies discern distinct spectroscopic and structural roles for the nucleobase ligands in C4AC4TC3G, and these finding may help develop new DNA templates for other silver cluster adducts.
作者: Jeffrey T. Petty,Mainak Ganguly,Ahmed Ibrahim Yunus,Chen He,Peter M. Goodwin,Yi-Han Lu,Robert M. Dickson
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Investigating the roles of nucleobase ligands in DNA-encapsulated silver clusters and their impact on the clusters' spectroscopic and structural properties.

The study concludes that the C4AC4TC3G DNA strand templates a specific Ag10 6+ cluster with distinct spectroscopic and structural properties, influenced by the nucleobase ligands. The findings suggest that modified nucleobases could expand the code of DNA sequences for controlling silver cluster chromophores' spectra and brightness.

The study is limited by the empirical tuning of cluster adducts due to poorly understood coordination environments. Additionally, the specificity of nucleobase roles in cluster formation and photophysics may not be generalizable to all DNA sequences.

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